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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
3
MeRIP-seq
Assay category
7
DNA binding
Target of assay
12
transcription factor
7
control
3
histone
3
histone modification
3
nucleotide modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
7
August, 2021
3
November, 2020
Available data
bam
78
fastq
50
bigWig
35
bed narrowPeak
20
bigBed narrowPeak
15
tagAlign
14
bed broadPeak
14
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
tissue
40
in vitro differentiated cells
37
primary cell
10
cell line
Organ
7
liver
3
epithelium
3
pancreas
Project
10
AMP
Genome assembly (visualization)
3
hg19
Lab
7
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bam
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
7
EndoC_BH1
3
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