Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
681
binding sites
673
histone modifications
250
target gene predictions
232
accessible chromatin
192
candidate regulatory elements
95
gene expression
21
chromatin state
10
differential activity
10
eQTL
10
variant allelic effects
1
representative DNase hypersensitivity sites
Date released
1493
February, 2021
September, 2022
200
February, 2024
173
June, 2020
102
May, 2021
70
October, 2022
40
August, 2021
18
November, 2022
17
March, 2020
13
January, 2022
9
August, 2017
9
March, 2023
9
May, 2020
7
May, 2022
4
January, 2020
4
September, 2023
3
November, 2019
2
October, 2019
1
February, 2023
1
March, 2024
Available data
2039
bed bed3+
97
tsv
24
csv
16
bigWig
7
bed bed9+
5
bed bed9
5
bigBed bed9
Organism
2175
Homo sapiens
Biosample type
1977
primary cell
1810
cell line
1258
tissue
365
in vitro differentiated cells
stem cell
Organ
130
bodily fluid
126
blood
109
embryo
63
epithelium
60
connective tissue
56
uterus
48
brain
38
lymph node
37
skin of body
28
pancreas
27
lung
26
prostate gland
23
bone element
22
intestine
22
large intestine
21
kidney
19
liver
18
mammary gland
13
eye
13
vasculature
10
heart
10
musculature of body
10
pituitary gland
9
penis
6
blood vessel
4
adipose tissue
4
artery
4
gonad
4
limb
4
lymphatic vessel
4
testis
3
lymphoid tissue
3
spinal cord
2
extraembryonic component
2
vein
1
mouth
1
nose
Project
2166
AMP
9
community
Genome assembly (visualization)
2050
hg19
212
GRCh38
1
hg18
biosample_type!
stem cell
month_released!
September, 2022
organ_slims!
esophagus
BIOSAMPLE
TYPE
2175 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
52
2
H1-hESC
2
1
38
1
8
EndoC_BH1
1
1
1
8
8
3
1
K562
2
1
17
1
1
1
breast cancer cell
9
11
+ See 746 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
1
7
adipocyte
1
1
4
4
2
1
4
embryonic stem cell
1
1
1
6
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 119 more…
See all biosamples
Download