Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
794
histone modifications
771
target gene predictions
743
binding sites
694
candidate regulatory elements
625
accessible chromatin
499
gene expression
386
chromatin state
161
differential activity
85
variant allelic effects
56
eQTL
7
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1760
February, 2021
1029
September, 2022
333
November, 2021
320
February, 2024
319
May, 2021
281
September, 2023
205
June, 2020
101
October, 2022
88
May, 2020
64
March, 2023
56
January, 2021
51
August, 2021
47
January, 2022
47
May, 2022
41
May, 2024
January, 2020
19
April, 2020
16
February, 2020
12
March, 2020
11
August, 2017
9
August, 2018
9
November, 2022
7
October, 2019
February, 2023
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
1
November, 2019
Available data
3733
bed bed3+
612
tsv
392
bigWig
341
bed bed9
108
txt
34
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
4788
Homo sapiens
Biosample type
2564
tissue
2483
primary cell
2350
cell line
467
in vitro differentiated cells
4
stem cell
Organ
856
epithelium
342
kidney
316
connective tissue
214
bodily fluid
204
blood
172
vasculature
170
skin of body
159
pancreas
149
embryo
130
lung
114
blood vessel
104
brain
91
liver
82
mammary gland
70
uterus
67
bone element
66
musculature of body
63
prostate gland
62
lymph node
57
intestine
56
penis
43
extraembryonic component
41
heart
40
large intestine
32
artery
32
eye
22
lymphatic vessel
20
vein
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
4130
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
11
community
Genome assembly (visualization)
4128
hg19
1083
GRCh38
1
hg18
month_released!
February, 2023
January, 2020
BIOSAMPLE
TYPE
4833 results
search-icon
table-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
86
2
1
18
15
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
5
7
4
3
1
B cell
10
17
6
2
8
endothelial cell
1
7
2
3
15
9
2
1
1
+ See 450 more…
cell line
HeLa-S3
55
1
5
3
A549
1
19
2
21
1
18
H1-hESC
1
39
2
1
1
8
1
K562
1
23
2
7
1
7
MCF-7
2
6
3
9
1
5
+ See 765 more…
See all biosamples
Download