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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
318
ChIP-seq
3
single cell RNA-seq
Assay category
318
DNA binding
3
Transcription
Target of assay
242
transcription factor
66
recombinant protein
57
control
35
RNA binding protein
16
histone
16
histone modification
15
chromatin remodeller
8
broad histone mark
8
narrow histone mark
2
other context
2
other post-translational modification
Date released
318
November, 2017
227
May, 2021
148
May, 2020
134
May, 2022
94
February, 2023
78
February, 2021
73
September, 2018
62
November, 2018
59
August, 2017
59
September, 2020
51
June, 2019
48
August, 2021
48
July, 2018
43
April, 2018
43
October, 2019
28
December, 2018
26
July, 2019
23
January, 2019
16
November, 2019
12
November, 2020
11
March, 2020
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
3
March, 2023
2
October, 2018
1
January, 2018
Available data
321
fastq
320
bam
274
bigWig
251
bed narrowPeak
251
bigBed narrowPeak
60
bed broadPeak
60
bigBed broadPeak
12
tagAlign
3
tar
3
tsv
Organism
321
Homo sapiens
Biosample type
315
cell line
82
tissue
6
primary cell
1
in vitro differentiated cells
Organ
315
liver
9
brain
9
epithelium
vasculature
3
blood vessel
3
pancreas
Project
321
AMP
Genome assembly (visualization)
272
hg19
222
GRCh38
Lab
321
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
vasculature
BIOSAMPLE
ASSAY
321 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
315
primary cell
astrocyte of the cerebellum
3
pancreatic alpha cell
2
pancreatic acinar cell
1
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