Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
635
binding sites
578
histone modifications
399
target gene predictions
325
candidate regulatory elements
190
chromatin state
151
accessible chromatin
13
gene expression
10
eQTL
7
differential activity
2
variant allelic effects
Date released
1290
February, 2021
536
September, 2022
168
February, 2024
149
June, 2020
70
October, 2022
48
May, 2021
10
January, 2022
9
August, 2021
8
March, 2020
7
March, 2023
7
May, 2022
6
August, 2017
1
March, 2024
1
September, 2023
Available data
2096
bed bed3+
177
bed bed9
13
tsv
7
bed bed9+
2
bigWig
Organism
2310
Homo sapiens
Biosample type
2492
tissue
2306
cell line
1617
primary cell
439
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
195
blood
128
embryo
96
lung
78
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
epithelium
41
kidney
36
mammary gland
34
intestine
34
large intestine
34
pancreas
32
connective tissue
28
liver
17
musculature of body
15
penis
11
vasculature
10
eye
10
pituitary gland
9
heart
7
gonad
7
limb
7
testis
6
blood vessel
6
lymphoid tissue
4
artery
4
mouth
3
adipose tissue
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2303
AMP
7
community
Genome assembly (visualization)
2279
hg19
361
GRCh38
1
hg18
organ_slims!
breast
epithelium
extraembryonic component
BIOSAMPLE
TYPE
2310 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
8
K562
2
1
23
7
7
1
MCF-7
3
2
6
9
5
1
+ See 754 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download