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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
64
transcription factor
24
control
22
histone
22
histone modification
11
RNA binding protein
11
broad histone mark
11
narrow histone mark
10
chromatin remodeller
7
recombinant protein
3
nucleotide modification
Date released
10
November, 2019
7
October, 2019
2
December, 2017
1
January, 2019
1
March, 2020
1
May, 2021
Available data
22
bam
21
bed narrowPeak
21
bigWig
7
bigBed narrowPeak
3
fastq
2
bed bed3+
Organism
22
Homo sapiens
Biosample type
509
tissue
234
primary cell
100
in vitro differentiated cells
20
cell line
2
stem cell
Organ
19
pancreas
liver
12
epithelium
1
blood
1
bodily fluid
Project
20
AMP
2
T1D
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
22
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
2
inconsistent control read length
organ_slims!
limb
liver
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
cell line
EndoC_BH1
12
Panc1
7
GM12878
1
stem cell
hESC
2
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