Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1241
candidate regulatory elements
904
target gene predictions
673
binding sites
670
histone modifications
347
accessible chromatin
127
gene expression
125
eQTL
74
Fine-mapped variants
52
variant allelic effects
37
chromatin state
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1915
February, 2021
1255
September, 2022
210
June, 2020
194
February, 2024
111
March, 2020
94
May, 2021
69
October, 2022
66
January, 2022
59
January, 2020
59
May, 2020
55
August, 2021
48
February, 2020
29
March, 2024
27
February, 2023
24
August, 2017
17
November, 2022
15
March, 2023
10
November, 2019
9
May, 2022
3
September, 2018
2
January, 2018
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
3917
bed bed3+
bed bed9
230
tsv
114
bigWig
22
bigBed bed9
7
bed bed9+
1
bam
Organism
4275
Homo sapiens
Biosample type
2333
primary cell
2147
tissue
2130
cell line
430
in vitro differentiated cells
4
stem cell
Organ
364
brain
274
kidney
255
musculature of body
211
intestine
211
lung
193
limb
184
bodily fluid
180
heart
175
blood
145
embryo
135
large intestine
135
pancreas
115
connective tissue
99
epithelium
85
stomach
79
adipose tissue
79
vasculature
78
skin of body
77
extraembryonic component
75
liver
74
blood vessel
74
eye
74
uterus
bone element
61
small intestine
57
prostate gland
54
lymph node
51
ureter
48
adrenal gland
48
placenta
40
artery
38
gonad
37
thymus
32
spinal cord
31
mammary gland
29
esophagus
28
spleen
21
nerve
21
testis
19
lymphoid tissue
17
ovary
16
thyroid gland
15
skeleton
13
penis
13
pituitary gland
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
3
vein
2
lymphatic vessel
Project
4263
AMP
9
community
5
ITG
Genome assembly (visualization)
4045
hg19
426
GRCh38
4
hg18
files.file_type!
bed bed9
month_released!
May, 2019
organ_slims!
bone element
BIOSAMPLE
TYPE
4277 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
chromatin state
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
1
2
10
7
1
1
brain
29
16
1
3
2
1
2
1
lung
33
17
1
1
+ See 249 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
2
1
1
8
A549
21
19
2
1
1
K562
7
23
2
1
1
1
EndoC_BH1
1
1
1
8
8
1
3
+ See 754 more…
See all biosamples
Download