Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
Hi-C
Assay category
13
3D chromatin structure
Date released
7
March, 2020
2
August, 2021
2
November, 2019
1
March, 2019
1
October, 2019
Available data
2489
bam
2294
bigWig
1388
bed narrowPeak
1194
tsv
916
bigBed narrowPeak
804
fastq
272
bed broadPeak
258
tagAlign
235
bigBed broadPeak
208
bed bed3+
158
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
13
hic
12
bedpe bed3+
6
bed bed3
6
csv
3
tar
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
11
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
4
pancreas
3
heart
2
liver
2
musculature of body
1
blood vessel
1
epithelium
1
kidney
1
vasculature
Project
13
AMP
Genome assembly (visualization)
13
hg19
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
organ_slims!
ovary
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
cell line
EndoC_BH1
1
HepG2
1
See all biosamples
Download