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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1104
candidate regulatory elements
827
target gene predictions
671
binding sites
660
histone modifications
614
chromatin state
341
accessible chromatin
124
gene expression
112
eQTL
65
Fine-mapped variants
48
variant allelic effects
13
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
Date released
1845
February, 2021
1684
September, 2022
206
June, 2020
192
February, 2024
96
March, 2020
87
May, 2021
69
October, 2022
64
January, 2022
58
January, 2020
58
May, 2020
47
August, 2021
41
February, 2020
27
February, 2023
27
March, 2024
18
August, 2017
17
November, 2022
15
March, 2023
10
November, 2019
8
April, 2019
7
May, 2019
7
May, 2022
October, 2019
2
January, 2018
2
September, 2018
1
August, 2020
1
August, 2022
Available data
3675
bed bed3+
583
bed bed9
213
tsv
115
bigWig
25
bigBed bed9
7
bed bed9+
Organism
4588
Homo sapiens
Biosample type
2352
primary cell
2307
cell line
2283
tissue
459
in vitro differentiated cells
4
stem cell
Organ
426
brain
342
kidney
musculature of body
277
lung
266
intestine
243
limb
221
heart
209
bodily fluid
198
blood
168
large intestine
162
embryo
147
pancreas
126
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
93
vasculature
88
blood vessel
87
adipose tissue
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4576
AMP
9
community
5
ITG
Genome assembly (visualization)
4367
hg19
990
GRCh38
2
hg18
month_released!
October, 2019
organ_slims!
liver
musculature of body
BIOSAMPLE
TYPE
4590 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
sQTL
caQTL
other
cell line
HeLa-S3
5
55
1
3
A549
21
19
2
1
18
1
H1-hESC
1
39
2
1
1
1
8
K562
7
23
2
1
7
1
MCF-7
9
6
3
2
5
1
+ See 758 more…
tissue
heart
37
20
1
1
21
5
3
2
stomach
40
21
1
19
3
1
1
kidney
29
14
1
2
16
10
7
1
1
brain
29
16
1
3
18
2
1
2
1
lung
33
17
16
1
1
+ See 236 more…
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