Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
pCHi-C
13
total RNA-seq
7
Hi-C
4
ATAC-seq
3
ChIP-seq
Assay category
13
Transcription
7
3D chromatin structure
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
641
February, 2021
363
November, 2017
282
August, 2017
272
August, 2021
272
October, 2019
194
May, 2020
163
June, 2019
120
July, 2018
111
May, 2019
101
February, 2023
77
July, 2019
76
April, 2019
66
May, 2022
66
November, 2018
63
October, 2018
61
May, 2021
55
November, 2019
50
March, 2020
47
September, 2023
46
December, 2017
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
3
December, 2019
3
January, 2018
2
March, 2023
1
August, 2022
1
October, 2022
Available data
36
tsv
18
bigWig
14
bam
7
bedpe bed3+
7
hic
3
bed narrowPeak
Organism
50
Homo sapiens
Biosample type
40
tissue
10
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
14
pancreas
7
heart
5
epithelium
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
43
AMP
7
T1D
Genome assembly (visualization)
25
hg19
14
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
organ_slims!
mammary gland
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
50 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
heart right ventricle
1
1
1
+ See 16 more…
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
See all biosamples
Download