Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 643binding sites
  • 584histone modifications
  • 399target gene predictions
  • 327candidate regulatory elements
  • 163accessible chromatin
  • 21gene expression
  • 12chromatin state
  • 10differential activity
  • 10eQTL
  • 4variant allelic effects
Date released
  • 1304February, 2021
  • 363September, 2022
  • 168February, 2024
  • 152June, 2020
  • 70October, 2022
  • 63May, 2021
  • 10January, 2022
  • 9August, 2021
  • 9March, 2023
  • 7March, 2020
  • 7May, 2022
  • 5August, 2017
  • 2May, 2020
  • 1February, 2023
  • 1January, 2020
  • 1March, 2024
  • 1November, 2019
Available data
  • 2135bed bed3+
  • bed bed9
  • 22tsv
  • 7bed bed9+
  • 4bigWig
Organism
  • 2173Homo sapiens
Collection Tags
  • 1306ChIP-Atlas
  • 358EpiMap
  • 216ENCODE
  • 1684DN
  • 61DGA
  • 25T1D
  • 18 T2DKP
  • 13AMP
  • 12CMDGA
  • 10T2D
  • 10eQTLCatalogue
  • 7BLUEPRINT
  • 1GTEx
  • 1T2DKP
Biosample type
  • 4837tissue
  • 2353primary cell
  • 2173cell line
  • 430in vitro differentiated cells
  • 4stem cell
Organ
  • 180bodily fluid
  • 172blood
  • 117embryo
  • 73lung
  • 66brain
  • 62uterus
  • 56skin of body
  • 54lymph node
  • 44prostate gland
  • 43bone element
  • 42epithelium
  • 34kidney
  • 31pancreas
  • 30intestine
  • 30large intestine
  • 29mammary gland
  • 28connective tissue
  • 25liver
  • 14musculature of body
  • 11penis
  • 11vasculature
  • 10pituitary gland
  • 9eye
  • 9heart
  • 6blood vessel
  • 6gonad
  • 6limb
  • 6testis
  • 5lymphoid tissue
  • 4artery
  • 3adipose tissue
  • 3mouth
  • 3spinal cord
  • 2extraembryonic component
  • 2lymphatic vessel
  • 2placenta
  • 2vein
Project
  • 2164AMP
  • 9community
Genome assembly (visualization)
  • 2131hg19
  • 186GRCh38
  • 1hg18
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

2173 results

search-icontable-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
cell line
HeLa-S31555
H1-hESC2139118
A5492119211
K5622123711
EndoC_BH11118831
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego