Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
4
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
17
DNA accessibility
4
Transcription
Date released
82
February, 2021
66
November, 2017
30
August, 2021
20
May, 2021
15
October, 2019
10
March, 2020
8
January, 2019
6
February, 2023
6
November, 2020
5
November, 2018
4
November, 2019
2
March, 2023
1
December, 2018
1
January, 2018
1
May, 2020
1
October, 2022
Available data
6
bigWig
5
bam
4
tsv
bed narrowPeak
Organism
26
Homo sapiens
Biosample type
167
primary cell
145
in vitro differentiated cells
74
tissue
27
cell line
1
stem cell
Organ
21
epithelium
21
pancreas
1
blood
1
bodily fluid
Project
22
AMP
5
T1D
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
22
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
20
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
cell line
EndoC_BH1
16
4
3
2
1
GM12878
1
Download