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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
12
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
91
February, 2021
33
August, 2021
23
October, 2019
21
May, 2021
15
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
0
December, 2018
Available data
16
bam
13
bed narrowPeak
13
bigWig
fastq
2
bigBed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
15
Homo sapiens
Biosample type
40
tissue
15
cell line
5
in vitro differentiated cells
Organ
15
epithelium
15
pancreas
Project
15
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
files.file_type!
fastq
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
12
1
1
1
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