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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
305
transcription factor
89
recombinant protein
70
control
55
RNA binding protein
26
histone
26
histone modification
20
chromatin remodeller
13
broad histone mark
13
narrow histone mark
2
other context
2
other post-translational modification
Date released
10
November, 2019
7
October, 2019
4
November, 2017
3
August, 2021
1
March, 2020
1
May, 2021
Available data
36
bigWig
34
bam
34
bed narrowPeak
19
bigBed narrowPeak
15
fastq
14
bed broadPeak
14
bigBed broadPeak
tagAlign
Organism
26
Homo sapiens
Biosample type
441
tissue
139
primary cell
86
in vitro differentiated cells
26
cell line
2
stem cell
Organ
19
pancreas
12
epithelium
7
liver
blood
1
bodily fluid
Project
24
AMP
2
T1D
Genome assembly (visualization)
25
hg19
22
GRCh38
Lab
23
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
tagAlign
month_released!
November, 2020
organ_slims!
blood
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
cell line
EndoC_BH1
12
HepG2
7
Panc1
7
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