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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
335
ChIP-seq
Assay category
335
DNA binding
Target of assay
335
transcription factor
89
recombinant protein
73
control
58
RNA binding protein
34
histone
34
histone modification
24
chromatin remodeller
18
broad histone mark
16
narrow histone mark
2
other context
2
other post-translational modification
Date released
240
November, 2017
57
November, 2018
25
December, 2018
January, 2019
7
October, 2019
5
February, 2021
1
November, 2019
Available data
335
bam
331
bigWig
327
bed narrowPeak
323
fastq
314
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
5
tagAlign
3
tar
Organism
335
Homo sapiens
Biosample type
335
cell line
89
tissue
37
in vitro differentiated cells
10
primary cell
Organ
285
liver
37
blood
37
bodily fluid
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
1
epithelium
1
pancreas
Project
335
AMP
Genome assembly (visualization)
327
hg19
295
GRCh38
Lab
335
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
1
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
month_released!
August, 2021
January, 2019
BIOSAMPLE
ASSAY
335 results
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ChIP-seq
cell line
HepG2
285
GM12878
37
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
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