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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
349
transcription factor
89
recombinant protein
76
control
64
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
broad histone mark
17
narrow histone mark
2
other context
2
other post-translational modification
Date released
36
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
November, 2019
Available data
66
bam
65
bed narrowPeak
65
bigWig
65
fastq
63
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
66
Homo sapiens
Biosample type
66
cell line
26
tissue
10
primary cell
6
in vitro differentiated cells
Organ
55
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
66
AMP
Genome assembly (visualization)
63
hg19
60
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
May, 2022
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
cell line
HepG2
55
GM12878
10
EndoC_BH1
1
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