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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
292
transcription factor
73
control
73
recombinant protein
43
RNA binding protein
35
histone
35
histone modification
23
chromatin remodeller
18
broad histone mark
17
narrow histone mark
2
other context
2
other post-translational modification
Date released
36
November, 2017
November, 2018
6
January, 2019
2
December, 2018
1
November, 2019
Available data
45
bam
44
bed narrowPeak
44
bigWig
44
fastq
42
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
45
Homo sapiens
Biosample type
45
cell line
23
tissue
10
primary cell
6
in vitro differentiated cells
Organ
36
liver
8
blood
8
bodily fluid
1
epithelium
1
pancreas
Project
45
AMP
Genome assembly (visualization)
42
hg19
39
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
month_released!
November, 2018
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
cell line
HepG2
36
GM12878
8
EndoC_BH1
1
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