Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 643binding sites
  • 584histone modifications
  • 399target gene predictions
  • 327candidate regulatory elements
  • 163accessible chromatin
  • 10eQTL
  • 5chromatin state
  • 4variant allelic effects
Date released
  • 1303February, 2021
  • 363September, 2022
  • 168February, 2024
  • 152June, 2020
  • 70October, 2022
  • 55May, 2021
  • 10January, 2022
  • 5August, 2017
  • 4March, 2020
  • 2May, 2020
  • 1August, 2021
  • 1January, 2020
  • 1November, 2019
Available data
  • 2135bed bed3+
  • 179bed bed9
  • 22tsv
  • 7bed bed9+
  • 4bigWig
Organism
  • 2135Homo sapiens
Collection Tags
  • 1306ChIP-Atlas
  • 358EpiMap
  • 216ENCODE
  • 1684DN
  • 57DGA
  • 17T1D
  • 12 T2DKP
  • 10T2D
  • 10eQTLCatalogue
  • 5AMP
  • 2CMDGA
  • 1T2DKP
Biosample type
  • 2135cell line
  • 1927tissue
  • 1669primary cell
  • 347in vitro differentiated cells
  • 4stem cell
Organ
  • 180bodily fluid
  • 172blood
  • 109embryo
  • 73lung
  • 66brain
  • 62uterus
  • 56skin of body
  • 54lymph node
  • 44prostate gland
  • 43bone element
  • 31epithelium
  • 31kidney
  • 30intestine
  • 30large intestine
  • 29mammary gland
  • 28connective tissue
  • 25liver
  • 20pancreas
  • 14musculature of body
  • 11penis
  • 10pituitary gland
  • 10vasculature
  • 9eye
  • 8heart
  • 6gonad
  • 6limb
  • 6testis
  • 5blood vessel
  • 5lymphoid tissue
  • 3adipose tissue
  • 3artery
  • 3mouth
  • 3spinal cord
  • 2extraembryonic component
  • 2lymphatic vessel
  • 2placenta
  • 2vein
Project
  • 2135AMP
Genome assembly (visualization)
  • 2124hg19
  • 186GRCh38
  • 1hg18
BIOSAMPLE
TYPE

2135 results

search-icontable-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
accessible chromatin
eQTL
chromatin state
variant allelic effects
cell line
HeLa-S31555
A5492119211
H1-hESC213911
K5622123711
MCF-732691
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego