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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
352
transcription factor
88
recombinant protein
63
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
narrow histone mark
17
broad histone mark
2
other context
2
other post-translational modification
Date released
6
November, 2017
4
November, 2019
3
October, 2019
2
August, 2021
1
January, 2019
1
March, 2020
1
May, 2021
Available data
19
bigWig
18
bed narrowPeak
17
bam
10
bigBed narrowPeak
8
fastq
6
bed broadPeak
6
bigBed broadPeak
5
tagAlign
Organism
18
Homo sapiens
Biosample type
264
tissue
104
primary cell
40
in vitro differentiated cells
18
cell line
1
stem cell
Organ
9
pancreas
8
liver
6
epithelium
1
blood
1
bodily fluid
Project
16
AMP
2
T1D
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
16
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
spleen
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
HepG2
8
EndoC_BH1
6
Panc1
3
GM12878
1
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