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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
347
ChIP-seq
Assay category
347
DNA binding
Target of assay
328
transcription factor
81
recombinant protein
61
RNA binding protein
30
chromatin remodeller
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
249
November, 2017
56
November, 2018
27
December, 2018
15
January, 2019
October, 2019
Available data
553
bam
502
bigWig
427
fastq
389
bed narrowPeak
347
bigBed narrowPeak
115
tsv
58
bed broadPeak
58
bigBed broadPeak
20
tagAlign
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
txt
1
vcf
0
bedpe
Organism
347
Homo sapiens
Biosample type
479
tissue
347
cell line
96
primary cell
1
in vitro differentiated cells
Organ
293
liver
54
blood
54
bodily fluid
Project
347
AMP
Genome assembly (visualization)
343
hg19
315
GRCh38
Lab
347
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
24
inconsistent control read length
8
inconsistent control run_type
month_released!
December, 2017
October, 2019
BIOSAMPLE
ASSAY
347 results
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ChIP-seq
cell line
HepG2
293
GM12878
54
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