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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
2
DNase-seq
Assay category
60
DNA binding
2
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
narrow histone mark
3
broad histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
October, 2019
Available data
216
bam
190
bigWig
104
tsv
96
bed narrowPeak
62
bigBed narrowPeak
60
fastq
8
tagAlign
2
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
hdf5
1
hic
1
txt
Organism
62
Homo sapiens
Biosample type
512
tissue
107
primary cell
62
cell line
3
in vitro differentiated cells
Organ
liver
54
blood
54
bodily fluid
7
pancreas
1
epithelium
1
kidney
Project
62
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
62
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bedpe
organ_slims!
liver
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
DNase-seq
cell line
GM12878
54
Panc1
6
1
glomerular visceral epithelial cell
1
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