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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
1
Hi-C
Assay category
54
DNA binding
1
3D chromatin structure
Target of assay
49
control
5
transcription factor
2
RNA binding protein
1
recombinant protein
Date released
47
November, 2017
4
November, 2018
3
January, 2019
1
December, 2018
Available data
531
bam
bigWig
427
fastq
389
bed narrowPeak
354
bigBed narrowPeak
84
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
1
bed bed3
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hdf5
1
hic
1
txt
1
vcf
Organism
55
Homo sapiens
Biosample type
103
primary cell
98
tissue
55
cell line
21
in vitro differentiated cells
1
stem cell
Organ
49
liver
6
blood
6
bodily fluid
Project
55
AMP
Lab
55
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bigWig
organ_slims!
epithelium
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
Hi-C
cell line
HepG2
48
1
GM12878
6
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