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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 221ChIP-seq
  • 5total RNA-seq
  • 1Hi-C
Assay category
  • 221DNA binding
  • 5Transcription
  • 13D chromatin structure
Target of assay
  • 174transcription factor
  • 82recombinant protein
  • 44control
  • 23RNA binding protein
  • 7chromatin remodeller
  • 1broad histone mark
  • 1histone
  • 1histone modification
Date released
  • 173November, 2017
  • 38November, 2018
  • 12January, 2019
  • 4December, 2018
Available data
  • 227fastq
  • 226bam
  • 179bigWig
  • 169bed narrowPeak
  • 169bigBed narrowPeak
  • 6bed broadPeak
  • 6bigBed broadPeak
  • 5tsv
  • 1tagAlign
Organism
  • 227Homo sapiens
Biosample type
  • 227cell line
  • 203tissue
  • 115primary cell
  • 17in vitro differentiated cells
Organ
  • 211liver
  • 16blood
  • 16bodily fluid
Project
  • 227AMP
Genome assembly (visualization)
  • 176hg19
  • 174GRCh38
Lab
  • 227AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

227 results

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ChIP-seq
total RNA-seq
Hi-C
cell line
HepG220551
GM1287816
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