Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58ChIP-seq
  • 5total RNA-seq
  • 1Hi-C
Assay category
  • 58DNA binding
  • 5Transcription
  • 13D chromatin structure
Target of assay
  • 33transcription factor
  • 25control
  • 12recombinant protein
  • 1RNA binding protein
  • 1chromatin remodeller
Date released
  • 53November, 2017
  • 10January, 2019
  • 1December, 2018
Available data
  • 64fastq
  • 63bam
  • 38bigWig
  • 28bed narrowPeak
  • 28bigBed narrowPeak
  • 5tsv
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 64Homo sapiens
Biosample type
  • 64cell line
  • 64primary cell
  • 57tissue
  • 18in vitro differentiated cells
  • 3stem cell
Organ
  • 59liver
  • 5blood
  • 5bodily fluid
Project
  • 64AMP
Genome assembly (visualization)
  • 38hg19
  • 33GRCh38
Lab
  • 64AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

64 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
cell line
HepG25351
GM128785
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego