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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 97ChIP-seq
  • 5total RNA-seq
  • 1Hi-C
  • 1WGBS
Assay category
  • 97DNA binding
  • 5Transcription
  • 13D chromatin structure
  • 1DNA methylation
Target of assay
  • 87transcription factor
  • 11RNA binding protein
  • 11chromatin remodeller
  • 6control
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 44November, 2017
  • 26December, 2018
  • 21November, 2018
  • 13January, 2019
Available data
  • 104fastq
  • 103bam
  • 97bigWig
  • 91bed narrowPeak
  • 91bigBed narrowPeak
  • 5tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 104Homo sapiens
Biosample type
  • 281primary cell
  • 202tissue
  • 104cell line
  • 2in vitro differentiated cells
Organ
  • 59liver
  • 45blood
  • 45bodily fluid
Project
  • 104AMP
Genome assembly (visualization)
  • 96hg19
  • 95GRCh38
Lab
  • 104AMP-T2D consortium
Audit category:
  • 7missing controlled_by
Audit category:
  • 8inconsistent control run_type
  • 7inconsistent control read length
BIOSAMPLE
ASSAY

104 results

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ChIP-seq
total RNA-seq
Hi-C
WGBS
cell line
HepG252511
GM1287845
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