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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
297
transcription factor
82
recombinant protein
60
control
54
RNA binding protein
20
chromatin remodeller
18
histone
18
histone modification
9
broad histone mark
9
narrow histone mark
2
other context
2
other post-translational modification
Date released
34
November, 2017
19
November, 2018
1
August, 2021
Available data
53
bam
53
fastq
52
bed narrowPeak
52
bigWig
51
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
54
Homo sapiens
Biosample type
54
cell line
2
in vitro differentiated cells
2
tissue
Organ
54
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
54
AMP
Genome assembly (visualization)
51
hg19
47
GRCh38
Lab
53
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
lab.title!
Struan F.A. Grant, CHOP
month_released!
October, 2019
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
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HepG2
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