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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
349
transcription factor
89
recombinant protein
74
control
63
RNA binding protein
30
chromatin remodeller
25
histone
25
histone modification
13
narrow histone mark
12
broad histone mark
2
other context
2
other post-translational modification
Date released
36
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
November, 2019
Available data
65
bam
65
fastq
63
bed narrowPeak
63
bigBed narrowPeak
63
bigWig
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
65
Homo sapiens
Biosample type
65
cell line
26
tissue
10
primary cell
6
in vitro differentiated cells
Organ
55
liver
10
blood
10
bodily fluid
Project
65
AMP
Genome assembly (visualization)
62
hg19
59
GRCh38
Lab
65
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
November, 2019
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
cell line
HepG2
55
GM12878
10
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