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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
52
total RNA-seq
9
ATAC-seq
1
pCHi-C
Assay category
66
DNA binding
52
Transcription
9
DNA accessibility
Target of assay
55
transcription factor
10
RNA binding protein
10
chromatin remodeller
8
control
1
histone
1
histone modification
1
narrow histone mark
Date released
66
February, 2021
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
1
March, 2020
Available data
126
bam
111
bigWig
66
bed narrowPeak
60
fastq
54
bigBed narrowPeak
53
tsv
6
tagAlign
Organism
128
Homo sapiens
Biosample type
133
tissue
128
cell line
45
primary cell
Organ
401
liver
92
pancreas
79
epithelium
66
artery
66
blood vessel
66
heart
66
vasculature
61
blood
61
bodily fluid
19
kidney
8
embryo
1
mammary gland
Project
128
AMP
Genome assembly (visualization)
119
hg19
118
GRCh38
Lab
128
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
March, 2023
BIOSAMPLE
ASSAY
128 results
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ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
6
52
8
GM12878
60
1
MCF-7
1
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