Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 579histone modifications
  • 574binding sites
  • 148candidate regulatory elements
  • 2accessible chromatin
  • 1gene expression
Date released
  • 1304February, 2021
  • 542September, 2022
  • 168February, 2024
  • 152June, 2020
  • 70October, 2022
  • 63May, 2021
  • 10January, 2022
  • 9August, 2021
  • 9March, 2023
  • 7March, 2020
  • 7May, 2022
  • 5August, 2017
  • 2May, 2020
  • 1February, 2023
  • 1January, 2020
  • 1March, 2024
  • 1November, 2019
Available data
  • 1303bed bed3+
  • 2bigWig
  • 1tsv
Organism
  • 1304Homo sapiens
Collection Tags
  • 1153ChIP-Atlas
  • 148ENCODE
  • 3DGA
  • 1 T2DKP
Biosample type
  • 1304cell line
  • 641tissue
  • 456primary cell
  • 189in vitro differentiated cells
Organ
  • 66bodily fluid
  • 62blood
  • 28embryo
  • 27lymph node
  • 24skin of body
  • 21prostate gland
  • 20brain
  • 18lung
  • 17bone element
  • 16connective tissue
  • 14epithelium
  • 13intestine
  • 13large intestine
  • 12mammary gland
  • 10kidney
  • 10vasculature
  • 8liver
  • 7heart
  • 6blood vessel
  • 5musculature of body
  • 4artery
  • 4eye
  • 3limb
  • 3pancreas
  • 3penis
  • 3uterus
  • 2adipose tissue
  • 2gonad
  • 2lymphatic vessel
  • 2testis
  • 2vein
  • 1lymphoid tissue
  • 1mouth
  • 1spinal cord
Project
  • 1304AMP
Genome assembly (visualization)
  • 1303hg19
  • 2GRCh38
BIOSAMPLE
TYPE

1304 results

search-icontable-tab-icon
Clear Filters
histone modifications
binding sites
candidate regulatory elements
accessible chromatin
gene expression
cell line
breast cancer cell119
neuroblastoma cell84
gastric cancer cell92
Rhabdomyosarcoma81
liposarcoma63
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego