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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
6
total RNA-seq
1
ATAC-seq
1
Hi-C
Assay category
31
DNA binding
6
Transcription
1
3D chromatin structure
1
DNA accessibility
Target of assay
15
transcription factor
11
histone
11
histone modification
7
RNA binding protein
6
broad histone mark
6
chromatin remodeller
5
control
5
narrow histone mark
Date released
315
November, 2017
96
February, 2021
61
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
38
bam
32
bigWig
27
bed narrowPeak
23
fastq
15
bigBed narrowPeak
6
tsv
1
bedpe bed3+
1
hic
Organism
39
Homo sapiens
Biosample type
47
tissue
39
cell line
5
in vitro differentiated cells
Organ
18
blood
18
bodily fluid
16
epithelium
16
pancreas
5
liver
Project
39
AMP
Genome assembly (visualization)
34
hg19
33
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
month_released!
August, 2017
January, 2021
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
cell line
GM12878
18
EndoC_BH1
13
1
1
1
HepG2
5
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