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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
ATAC-seq
1
ChIP-seq
1
Hi-C
1
total RNA-seq
Assay category
1
3D chromatin structure
1
DNA accessibility
1
DNA binding
1
Transcription
Target of assay
10
histone
histone modification
6
broad histone mark
4
narrow histone mark
control
1
RNA binding protein
1
transcription factor
Date released
244
November, 2017
93
February, 2021
58
November, 2018
37
August, 2021
28
December, 2018
20
May, 2021
19
January, 2019
14
October, 2019
10
March, 2020
6
February, 2023
4
November, 2019
3
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
3
bam
2
bed narrowPeak
2
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
4
Homo sapiens
Biosample type
40
tissue
5
in vitro differentiated cells
4
cell line
Organ
4
epithelium
4
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
target.investigated_as!
control
histone modification
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
1
1
1
1
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