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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 10ChIP-seq
  • 4total RNA-seq
  • 2STARR-seq
  • 2pCHi-C
  • 1DNase-seq
Assay category
  • 10DNA binding
  • 4Transcription
  • 1DNA accessibility
Target of assay
  • 7recombinant protein
  • 7transcription factor
  • 3control
Date released
  • 15October, 2019
  • 2August, 2021
  • 2March, 2020
Available data
  • 15bam
  • 12bigWig
  • 8bed narrowPeak
  • 6tsv
  • 1bigBed narrowPeak
Organism
  • 19Homo sapiens
Biosample type
  • 299tissue
  • 36primary cell
  • 19cell line
Organ
  • 401liver
  • 92pancreas
  • 79epithelium
  • 66artery
  • 66blood vessel
  • 66heart
  • 66vasculature
  • 61blood
  • 61bodily fluid
  • 19kidney
  • 8embryo
  • 1mammary gland
Project
  • 19AMP
Genome assembly (visualization)
  • 12GRCh38
  • 12hg19
Lab
  • 17AMP-T2D consortium
  • 2Bing Ren, UCSD
Audit category:
  • 15inconsistent ontology term
BIOSAMPLE
ASSAY

19 results

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Clear Filters
ChIP-seq
total RNA-seq
STARR-seq
pCHi-C
DNase-seq
cell line
RCC 7860 HIF1a re-expression41
RCC 7860 vector311
RCC 7860 HIF2a over-expression31
HEK293T2
glomerular visceral epithelial cell11
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