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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
643
binding sites
606
target gene predictions
584
histone modifications
191
chromatin state
179
candidate regulatory elements
163
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
1156
February, 2021
542
September, 2022
207
July, 2026
168
February, 2024
152
June, 2020
70
October, 2022
63
May, 2021
10
January, 2022
9
August, 2021
9
March, 2023
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
1
February, 2023
1
January, 2020
1
March, 2024
1
November, 2019
Available data
2194
bed bed3+
179
bed bed9
22
tsv
7
bed bed9+
4
bigWig
Organism
2411
Homo sapiens
Collection Tags
1306
ChIP-Atlas
537
EpiMap
207
ENCODE-rE2G
168
4DN
68
ENCODE
61
DGA
25
T1D
18
T2DKP
13
AMP
12
CMDGA
10
T2D
10
eQTLCatalogue
7
BLUEPRINT
1
GTEx
1
T2DKP
Biosample type
5473
tissue
3765
primary cell
2411
cell line
470
in vitro differentiated cells
4
stem cell
Organ
231
blood
187
bodily fluid
118
lung
113
embryo
80
brain
73
skin of body
70
uterus
54
bone element
52
intestine
52
large intestine
50
prostate gland
49
lymph node
43
epithelium
41
kidney
41
mammary gland
36
pancreas
31
liver
29
connective tissue
14
musculature of body
12
penis
11
eye
11
vasculature
10
pituitary gland
9
heart
7
gonad
7
testis
6
blood vessel
6
limb
6
lymphoid tissue
4
artery
4
extraembryonic component
4
placenta
3
adipose tissue
3
mouth
3
spinal cord
2
lymphatic vessel
2
urinary bladder
2
vein
1
muscle organ
Project
2402
AMP
9
community
Genome assembly (visualization)
2162
hg19
572
GRCh38
1
hg18
software_used.software.name!
encode-ccres
BIOSAMPLE
TYPE
2411 results
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Clear Filters
binding sites
target gene predictions
histone modifications
chromatin state
candidate regulatory elements
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
A549
2
33
1
18
18
1
HeLa-S3
1
59
3
3
H1-hESC
2
39
1
1
1
1
8
K562
2
30
1
7
6
1
MCF-7
3
13
2
5
5
1
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