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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 65ChIP-seq
Assay category
  • 65DNA binding
Target of assay
  • 361transcription factor
  • 89recombinant protein
  • 83control
  • 65RNA binding protein
  • 38histone
  • 38histone modification
  • 30chromatin remodeller
  • 19broad histone mark
  • 19narrow histone mark
  • 3nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 34November, 2017
  • 21November, 2018
  • 6January, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 64bam
  • 63bed narrowPeak
  • 63bigWig
  • 63fastq
  • 61bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1tar
Organism
  • 65Homo sapiens
Biosample type
  • 65cell line
  • 28tissue
  • 11in vitro differentiated cells
  • 10primary cell
Organ
  • 54liver
  • 10blood
  • 10bodily fluid
  • 1epithelium
  • 1pancreas
Project
  • 65AMP
Genome assembly (visualization)
  • 62hg19
  • 58GRCh38
Lab
  • 64AMP-T2D consortium
  • 1Bing Ren, UCSD
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

65 results

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