Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 80ChIP-seq
  • 3MeRIP-seq
Assay category
  • 80DNA binding
Target of assay
  • 361transcription factor
  • 89recombinant protein
  • 83control
  • 65RNA binding protein
  • 38histone
  • 38histone modification
  • 30chromatin remodeller
  • 19broad histone mark
  • 19narrow histone mark
  • 3nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 56November, 2017
  • 9October, 2019
  • 4August, 2021
  • 3February, 2021
  • 3January, 2019
  • 3November, 2018
  • 3November, 2020
  • 2November, 2019
Available data
  • 76bam
  • 62fastq
  • 13bigWig
  • 4tagAlign
Organism
  • 83Homo sapiens
Biosample type
  • 187tissue
  • 83cell line
  • 37in vitro differentiated cells
  • 35primary cell
  • 1stem cell
Organ
  • 60liver
  • 11pancreas
  • 6blood
  • 6bodily fluid
  • 5epithelium
  • 3kidney
  • 2artery
  • 2blood vessel
  • 2heart
  • 2vasculature
Project
  • 83AMP
Genome assembly (visualization)
  • 13hg19
Lab
  • 76AMP-T2D consortium
  • 4Bing Ren, UCSD
  • 3Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
  • 8inconsistent ontology term
BIOSAMPLE
ASSAY

83 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
cell line
HepG260
GM128786
Panc16
EndoC_BH123
smooth muscle cell of the coronary artery2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego