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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
pCHi-C
Assay category
4
3D chromatin structure
Date released
4
March, 2020
2
October, 2019
Available data
288
bam
257
bigWig
140
fastq
131
tsv
130
bed narrowPeak
37
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
6
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
6
Homo sapiens
Biosample type
7
tissue
6
in vitro differentiated cells
cell line
1
primary cell
Organ
adipose tissue
1
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
6
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
6 results
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Hi-C
pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
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