Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
437
target gene predictions
407
candidate regulatory elements
304
histone modifications
138
binding sites
87
variant allelic effects
44
eQTL
37
chromatin state
25
gene expression
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
496
February, 2021
397
September, 2022
333
November, 2021
210
May, 2021
122
February, 2024
93
May, 2020
74
June, 2020
56
January, 2021
41
August, 2021
40
January, 2022
40
May, 2022
31
October, 2022
27
November, 2022
24
January, 2020
19
April, 2020
February, 2020
13
March, 2020
10
August, 2017
9
August, 2018
7
October, 2019
4
February, 2023
4
September, 2023
2
November, 2019
2
November, 2020
1
June, 2021
Available data
1942
bed bed3+
tsv
422
bigWig
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2010
Homo sapiens
Biosample type
2151
cell line
1953
tissue
1700
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
479
epithelium
259
connective tissue
108
vasculature
92
skin of body
79
pancreas
73
blood vessel
56
kidney
48
musculature of body
46
liver
42
mammary gland
41
penis
40
embryo
36
extraembryonic component
34
brain
30
lung
26
eye
24
heart
23
intestine
20
artery
16
vein
14
bronchus
13
bone element
12
bone marrow
12
lymphatic vessel
11
adrenal gland
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
nose
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
testis
1
thymus
Project
1644
AMP
333
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1986
hg19
564
GRCh38
files.file_type!
bed bed9
tsv
month_released!
February, 2020
BIOSAMPLE
TYPE
2055 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
eQTL
chromatin state
gene expression
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
1
common myeloid progenitor, CD34-positive
14
27
endothelial cell
15
7
1
2
2
1
1
2
B cell
6
10
14
+ See 340 more…
in vitro differentiated cells
neural progenitor cell
10
5
5
15
hematopoietic multipotent progenitor cell
1
10
19
1
1
adipocyte
4
6
4
1
1
4
embryonic stem cell
6
1
1
1
mesenchymal stem cell
1
3
3
1
1
+ See 106 more…
See all biosamples
Download