Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
552
gene expression
445
accessible chromatin
437
target gene predictions
407
candidate regulatory elements
304
histone modifications
239
chromatin state
152
differential activity
138
binding sites
87
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
645
February, 2021
592
September, 2022
333
November, 2021
295
May, 2021
285
September, 2023
184
February, 2024
93
May, 2020
June, 2020
73
August, 2021
56
January, 2021
55
March, 2023
40
January, 2022
40
May, 2022
31
October, 2022
November, 2022
26
January, 2020
19
April, 2020
16
February, 2020
15
March, 2020
10
August, 2017
9
August, 2018
October, 2019
4
February, 2023
3
November, 2020
2
May, 2024
2
November, 2019
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1838
bed bed3+
666
tsv
413
bigWig
202
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
7
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2786
Homo sapiens
Biosample type
2567
tissue
2402
primary cell
2200
cell line
429
in vitro differentiated cells
4
stem cell
Organ
816
epithelium
311
connective tissue
304
kidney
167
vasculature
123
pancreas
111
blood vessel
103
skin of body
68
liver
51
musculature of body
50
embryo
46
mammary gland
44
penis
42
extraembryonic component
38
brain
34
lung
32
heart
27
artery
23
intestine
21
eye
19
vein
18
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
prostate gland
9
placenta
8
blood
8
bodily fluid
6
large intestine
4
mouth
4
small intestine
4
spinal cord
4
trachea
4
uterus
3
gonad
3
nose
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2137
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
2084
hg19
764
GRCh38
month_released!
June, 2020
November, 2022
October, 2019
BIOSAMPLE
TYPE
2831 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
15
16
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 442 more…
in vitro differentiated cells
neural progenitor cell
7
10
5
5
15
4
hematopoietic multipotent progenitor cell
1
10
19
1
10
1
adipocyte
1
1
6
4
1
6
1
embryonic stem cell
5
1
1
5
1
cardiomyocytes
11
+ See 111 more…
See all biosamples
Download