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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1002
candidate regulatory elements
575
target gene predictions
546
chromatin state
183
gene expression
183
histone modifications
135
accessible chromatin
113
eQTL
74
binding sites
71
Fine-mapped variants
54
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1460
September, 2022
815
February, 2021
111
March, 2020
83
June, 2020
70
August, 2021
69
May, 2021
60
May, 2020
55
January, 2022
47
February, 2020
45
February, 2024
28
March, 2024
24
November, 2022
23
August, 2017
21
January, 2020
8
April, 2019
7
February, 2023
7
May, 2019
6
March, 2023
4
September, 2023
3
October, 2019
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
November, 2019
Available data
2174
bed bed3+
519
bed bed9
282
tsv
bigWig
36
bigBed bed9
24
csv
1
bam
Organism
2952
Homo sapiens
Biosample type
2496
tissue
2345
cell line
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
340
brain
304
musculature of body
285
kidney
232
intestine
222
limb
200
heart
181
lung
136
connective tissue
134
large intestine
108
stomach
103
extraembryonic component
101
pancreas
80
adipose tissue
80
small intestine
78
vasculature
76
blood vessel
65
embryo
64
epithelium
63
liver
62
adrenal gland
61
ureter
60
placenta
48
thymus
45
eye
39
gonad
36
artery
spinal cord
35
esophagus
34
skin of body
33
spleen
23
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
testis
15
prostate gland
14
bone element
13
breast
13
uterus
11
mouth
10
skeleton
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
2949
AMP
5
ITG
Genome assembly (visualization)
2679
hg19
689
GRCh38
3
hg18
biosample_type!
primary cell
files.file_type!
bigWig
organ_slims!
spinal cord
BIOSAMPLE
TYPE
2954 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
accessible chromatin
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
3
1
2
1
2
stomach
40
21
19
1
1
3
1
brain
29
16
18
1
3
1
2
1
1
kidney
29
14
15
7
2
1
1
1
1
lung
33
17
16
1
1
+ See 240 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
7
15
10
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
1
1
3
1
embryonic stem cell
1
5
1
6
1
cardiomyocytes
11
+ See 120 more…
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