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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
998
candidate regulatory elements
570
target gene predictions
538
chromatin state
182
histone modifications
177
gene expression
135
accessible chromatin
109
eQTL
74
binding sites
65
Fine-mapped variants
48
variant allelic effects
4
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1451
September, 2022
812
February, 2021
103
March, 2020
83
June, 2020
69
August, 2021
69
May, 2021
53
January, 2022
53
May, 2020
45
February, 2020
44
February, 2024
27
March, 2024
24
November, 2022
23
August, 2017
18
January, 2020
8
April, 2019
7
May, 2019
6
February, 2023
6
March, 2023
4
September, 2023
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
November, 2019
1
October, 2019
Available data
2150
bed bed3+
510
bed bed9
267
tsv
bigWig
30
bigBed bed9
24
csv
1
bam
Organism
2910
Homo sapiens
Biosample type
2454
tissue
2343
cell line
1961
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
340
brain
304
musculature of body
285
kidney
232
intestine
222
limb
200
heart
181
lung
135
connective tissue
134
large intestine
108
stomach
103
extraembryonic component
100
pancreas
80
small intestine
79
adipose tissue
78
vasculature
blood vessel
65
embryo
64
epithelium
63
liver
62
adrenal gland
61
ureter
60
placenta
48
thymus
45
eye
39
gonad
36
artery
36
spinal cord
35
esophagus
34
skin of body
33
spleen
23
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
testis
15
prostate gland
14
bone element
13
breast
13
uterus
11
mouth
10
skeleton
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
2907
AMP
5
ITG
Genome assembly (visualization)
2647
hg19
670
GRCh38
3
hg18
files.file_type!
bigWig
month_released!
January, 2018
organ_slims!
blood vessel
BIOSAMPLE
TYPE
2912 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
gene expression
accessible chromatin
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
sQTL
caQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
1
3
2
1
2
stomach
40
21
19
1
1
3
1
brain
29
16
18
3
1
1
2
1
1
kidney
29
14
15
2
7
1
1
1
1
lung
33
17
16
1
1
+ See 233 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
15
7
10
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
1
1
3
1
embryonic stem cell
1
5
1
6
1
cardiomyocytes
11
+ See 120 more…
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