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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
998
candidate regulatory elements
570
target gene predictions
538
chromatin state
182
histone modifications
179
gene expression
135
accessible chromatin
74
binding sites
65
Fine-mapped variants
56
eQTL
48
variant allelic effects
4
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1451
September, 2022
812
February, 2021
103
March, 2020
83
June, 2020
69
August, 2021
69
May, 2021
January, 2022
53
May, 2020
45
February, 2020
44
February, 2024
27
March, 2024
24
November, 2022
23
August, 2017
18
January, 2020
8
April, 2019
7
May, 2019
6
February, 2023
6
March, 2023
4
September, 2023
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
November, 2019
1
October, 2019
Available data
2147
bed bed3+
510
bed bed9
269
tsv
bigWig
30
bigBed bed9
24
csv
1
bam
Organism
2859
Homo sapiens
Biosample type
2403
tissue
2333
cell line
1925
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
323
brain
303
musculature of body
284
kidney
229
intestine
220
limb
197
heart
180
lung
133
connective tissue
132
large intestine
107
stomach
102
extraembryonic component
97
pancreas
79
small intestine
77
adipose tissue
75
vasculature
blood vessel
65
embryo
64
epithelium
62
liver
61
adrenal gland
61
ureter
59
placenta
48
thymus
45
eye
37
gonad
35
spinal cord
33
artery
32
esophagus
32
spleen
31
skin of body
22
nerve
20
ovary
19
thyroid gland
18
lymphoid tissue
17
testis
14
bone element
14
prostate gland
12
breast
12
uterus
10
mouth
10
skeleton
10
tongue
10
urinary bladder
9
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
2
lymphatic vessel
2
pituitary gland
1
vein
Project
2856
AMP
5
ITG
Genome assembly (visualization)
2647
hg19
617
GRCh38
3
hg18
files.file_type!
bigWig
month_released!
January, 2022
organ_slims!
blood vessel
BIOSAMPLE
TYPE
2861 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
gene expression
accessible chromatin
binding sites
Fine-mapped variants
eQTL
variant allelic effects
differential activity
variant to gene
pQTL
sQTL
caQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
1
3
2
1
2
stomach
40
21
19
1
1
3
kidney
29
14
15
2
7
1
1
1
1
brain
29
16
18
3
1
1
1
1
lung
33
17
16
1
+ See 228 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
15
7
10
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
1
1
3
1
embryonic stem cell
1
5
1
6
1
cardiomyocytes
11
+ See 120 more…
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