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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
Assay category
107
DNA binding
Target of assay
598
histone modification
597
histone
306
narrow histone mark
290
broad histone mark
107
transcription factor
32
RNA binding protein
5
chromatin remodeller
3
other context
3
other post-translational modification
Date released
42
December, 2017
22
August, 2017
15
October, 2018
7
November, 2018
5
April, 2019
5
May, 2024
4
May, 2019
4
May, 2021
3
December, 2018
Available data
130
bigWig
126
bam
112
fastq
107
bed narrowPeak
67
bigBed narrowPeak
19
bed bed3+
4
tagAlign
Organism
107
Homo sapiens
Biosample type
352
cell line
75
tissue
32
in vitro differentiated cells
10
primary cell
Organ
41
liver
22
connective tissue
12
heart
12
pancreas
6
spleen
5
adipose tissue
3
blood vessel
3
embryo
3
epithelium
3
vasculature
1
artery
Project
107
AMP
Genome assembly (visualization)
107
GRCh38
102
hg19
Lab
102
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
10
inconsistent control read length
files.file_type!
txt
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
tissue
liver
37
body of pancreas
9
spleen
6
heart left ventricle
5
left cardiac atrium
5
+ See 9 more…
in vitro differentiated cells
adipocyte
17
cardiomyocytes
3
pancreatic endoderm
3
Posterior foregut
2
definitive endodermal cell
2
+ See 3 more…
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