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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
March, 2020
3
October, 2019
1
August, 2021
1
March, 2019
1
November, 2019
Available data
1928
bam
1728
bigWig
1175
tsv
824
bed narrowPeak
442
fastq
367
bigBed narrowPeak
220
bed bed3+
194
bed broadPeak
188
tagAlign
177
bigBed broadPeak
160
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
10
bed bed3
7
bed bedgraph
6
bedpe bed3+
6
csv
6
hic
1
bedpe
1
tagAlign bed3+
Organism
6
Homo sapiens
Biosample type
5
primary cell
4
tissue
2
cell line
2
in vitro differentiated cells
Organ
2
pancreas
1
heart
1
kidney
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
2
inconsistent ontology term
month_released!
March, 2020
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
6 results
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Clear Filters
Hi-C
tissue
islet of Langerhans
2
heart
1
kidney
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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