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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
740
ChIP-seq
Assay category
740
DNA binding
Target of assay
740
histone modification
739
histone
379
narrow histone mark
359
broad histone mark
222
control
143
transcription factor
39
RNA binding protein
5
chromatin remodeller
3
other context
3
other post-translational modification
Date released
168
October, 2019
161
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
29
December, 2017
27
May, 2020
21
May, 2021
16
February, 2018
14
August, 2021
12
October, 2017
6
January, 2019
2
March, 2020
Available data
600
bigWig
598
bed narrowPeak
545
bam
324
bigBed narrowPeak
212
tagAlign
139
fastq
35
bed broadPeak
20
bed bed3+
1
tagAlign bed3+
Organism
734
Homo sapiens
Biosample type
628
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
95
heart
82
liver
74
pancreas
70
connective tissue
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
15
epithelium
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
738
AMP
2
T1D
Genome assembly (visualization)
572
GRCh38
515
hg19
Lab
685
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
20
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
13
inconsistent control read length
1
inconsistent assembly
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
740 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
+ See 100 more…
in vitro differentiated cells
adipocyte
37
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
+ See 7 more…
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