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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
990
candidate regulatory elements
568
target gene predictions
542
chromatin state
264
accessible chromatin
178
histone modifications
160
gene expression
89
eQTL
74
Fine-mapped variants
72
binding sites
54
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1443
September, 2022
810
February, 2021
113
March, 2020
82
June, 2020
77
August, 2021
67
May, 2020
67
May, 2021
65
January, 2020
59
January, 2022
58
February, 2024
February, 2020
35
November, 2022
28
March, 2024
26
February, 2023
23
August, 2017
12
November, 2019
9
May, 2019
8
April, 2019
7
October, 2019
6
March, 2023
4
September, 2023
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
2147
bed bed3+
513
bed bed9
238
tsv
132
bigWig
36
bigBed bed9
24
csv
1
bam
Organism
3008
Homo sapiens
Biosample type
2569
tissue
2472
primary cell
2225
cell line
440
in vitro differentiated cells
3
stem cell
Organ
335
brain
303
musculature of body
300
kidney
232
intestine
230
limb
208
heart
181
lung
141
connective tissue
134
large intestine
115
pancreas
108
stomach
103
extraembryonic component
86
epithelium
83
vasculature
81
adipose tissue
81
blood vessel
80
small intestine
74
eye
embryo
64
ureter
63
liver
62
adrenal gland
60
placenta
48
thymus
40
artery
39
gonad
35
esophagus
35
spinal cord
34
skin of body
34
spleen
22
bone element
22
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
3004
AMP
5
ITG
Genome assembly (visualization)
2757
hg19
761
GRCh38
3
hg18
month_released!
February, 2020
organ_slims!
embryo
BIOSAMPLE
TYPE
3009 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
5
1
2
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
2
7
1
1
1
brain
29
16
18
2
3
2
1
1
lung
33
17
16
1
1
+ See 251 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
10
15
7
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
4
1
1
1
embryonic stem cell
1
5
6
1
1
cardiomyocytes
11
+ See 113 more…
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