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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
ATAC-seq
2
Hi-C
Assay category
14
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
12
histone
12
histone modification
8
broad histone mark
4
narrow histone mark
2
control
Date released
47
May, 2021
16
February, 2023
14
August, 2017
6
March, 2020
5
August, 2021
4
February, 2021
4
January, 2018
4
October, 2019
2
December, 2019
1
August, 2018
Available data
bam
54
fastq
52
bigWig
45
bed narrowPeak
14
tagAlign
7
bed bed3+
3
bigBed narrowPeak
2
bedpe bed3+
2
hic
2
tsv
1
bed broadPeak
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
170
tissue
18
in vitro differentiated cells
4
primary cell
1
cell line
Organ
16
connective tissue
Project
18
AMP
Genome assembly (visualization)
4
hg19
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
bigBed broadPeak
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
in vitro differentiated cells
adipocyte
14
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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