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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
Assay category
53
DNA binding
Target of assay
104
histone
104
histone modification
52
broad histone mark
narrow histone mark
43
transcription factor
32
control
11
RNA binding protein
3
chromatin remodeller
0
nucleotide modification
Date released
21
August, 2017
10
May, 2021
8
February, 2018
7
August, 2021
7
December, 2017
Available data
38
bam
38
bed narrowPeak
38
bigWig
32
fastq
14
tagAlign
7
bigBed narrowPeak
bed bed3+
Organism
53
Homo sapiens
Biosample type
300
tissue
121
primary cell
53
in vitro differentiated cells
22
cell line
Organ
21
connective tissue
7
epithelium
7
liver
3
embryo
Project
53
AMP
Genome assembly (visualization)
34
GRCh38
33
hg19
Lab
43
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control read length
files.file_type!
bed bed3+
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
in vitro differentiated cells
adipocyte
21
embryonic stem cell
11
hepatocyte
7
neural progenitor cell
7
pancreatic endoderm
3
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