Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 94histone modifications
  • 79candidate regulatory elements
  • 74gene expression
  • 69accessible chromatin
  • 65target gene predictions
  • 38binding sites
  • 6variant allelic effects
  • 4chromatin state
  • 1representative DNase hypersensitivity sites
Date released
  • 189February, 2021
  • 70September, 2022
  • 34May, 2021
  • 32February, 2024
  • 31August, 2021
  • 21June, 2020
  • 18November, 2022
  • 10March, 2020
  • 7May, 2020
  • 4August, 2017
  • 4September, 2023
  • 3January, 2020
  • 3January, 2022
  • 2November, 2019
  • 2October, 2019
Available data
  • 347bed bed3+
  • 75tsv
  • bed bed9
  • 24csv
  • 12bigWig
  • 5bigBed bed9
Organism
  • 430Homo sapiens
Collection Tags
  • 139ChIP-Atlas
  • 97AMP
  • 70EpiMap
  • 47ENCODE
  • 43DGA
  • 23CMDGA
  • 7 T2DKP
  • 4T2DKP
Biosample type
  • 4837tissue
  • 2353primary cell
  • 2173cell line
  • 430in vitro differentiated cells
  • 4stem cell
Organ
  • 46connective tissue
  • 25epithelium
  • 24embryo
  • 9skin of body
  • 6eye
  • 6liver
  • 6penis
  • 4brain
  • 4extraembryonic component
  • 3mammary gland
  • 3nose
  • 3pancreas
  • 2lymphatic vessel
  • 2musculature of body
  • 2vasculature
  • 1adipose tissue
  • 1heart
  • 1kidney
Project
  • 430AMP
Genome assembly (visualization)
  • 347hg19
  • 30GRCh38
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

430 results

search-icontable-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
binding sites
variant allelic effects
chromatin state
representative DNase hypersensitivity sites
in vitro differentiated cells
neural progenitor cell1557105
hematopoietic multipotent progenitor cell11911101
adipocyte1414614
cardiomyocytes11
embryonic stem cell1611
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego