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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
ATAC-seq
2
Capture-C
Assay category
7
DNA binding
4
DNA accessibility
Target of assay
6
transcription factor
1
control
Date released
December, 2017
7
August, 2017
4
February, 2023
2
August, 2021
Available data
248
bam
225
bigWig
131
tsv
98
bed narrowPeak
98
fastq
40
tagAlign
13
bed bed3+
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
bigBed narrowPeak
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
29
tissue
13
in vitro differentiated cells
10
primary cell
2
cell line
Organ
13
connective tissue
Project
13
AMP
Genome assembly (visualization)
13
hg19
7
GRCh38
Lab
11
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
Audit category:
4
inconsistent control read length
files.file_type!
bigBed narrowPeak
month_released!
December, 2017
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
7
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
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