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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
5
ChIP-seq
2
Capture-C
Assay category
6
DNA accessibility
5
DNA binding
Target of assay
5
control
Date released
4
December, 2017
4
February, 2023
2
August, 2021
2
October, 2019
1
August, 2017
Available data
291
bam
259
bigWig
141
fastq
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
18
tissue
13
in vitro differentiated cells
4
primary cell
2
cell line
1
stem cell
Organ
9
connective tissue
1
embryo
Project
13
AMP
Genome assembly (visualization)
13
hg19
5
GRCh38
Lab
11
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
brain
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
ChIP-seq
Capture-C
in vitro differentiated cells
adipocyte
3
1
1
immature adipocyte
2
Posterior foregut
1
definitive endodermal cell
1
osteoblast
1
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